Custom types#
The data_type parameter of the DataConfig class is a string that is used to choose the data loader within CAREamics. We currently only support array and tiff explicitly.
However, users can set the data_type to custom and use their own read function.
Custom data type
from careamics.config import DataConfig
data_config = DataConfig(
data_type="custom", # (1)!
axes="YX",
patch_size=[128, 128],
batch_size=8,
num_epochs=20,
)
- As far as the configuration is concerned, you only set the
data_typetocustom. The rest happens in theCAREamistinstance.
Full example in other sections
A full example of the use of a custom data type is available in the CAREamist and Applications sections.