bioimage_utils
Bioimage.io utils.
create_env_text(pytorch_version, torchvision_version)
#
Create environment yaml content for the bioimage model.
This installs an environment with the specified pytorch version and the latest changes to careamics.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
pytorch_version | str | Pytorch version. | required |
torchvision_version | str | Torchvision version. | required |
Returns:
Type | Description |
---|---|
str | Environment text. |
Source code in src/careamics/model_io/bioimage/bioimage_utils.py
get_unzip_path(zip_path)
#
Generate unzipped folder path from the bioimage.io model path.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
zip_path | Path | Path to the bioimage.io model. | required |
Returns:
Type | Description |
---|---|
Path | Path to the unzipped folder. |