CARE Algorithm Config
CARE algorithm configuration.
CAREAlgorithm
Bases: UNetBasedAlgorithm
CARE algorithm configuration.
Attributes:
| Name | Type | Description |
|---|---|---|
algorithm |
care
|
CARE Algorithm name. |
loss |
{mae, mse}
|
CARE-compatible loss function. |
algorithm = 'care'
class-attribute
instance-attribute
CARE Algorithm name.
loss = 'mae'
class-attribute
instance-attribute
CARE-compatible loss function.
lr_scheduler = LrSchedulerConfig()
class-attribute
instance-attribute
Learning rate scheduler to use, defined in SupportedLrScheduler.
model
instance-attribute
UNet without a final activation function and without the n2v2 modifications.
optimizer = OptimizerConfig()
class-attribute
instance-attribute
Optimizer to use, defined in SupportedOptimizer.
get_algorithm_citations()
Return a list of citation entries of the current algorithm.
This is used to generate the model description for the BioImage Model Zoo.
Returns:
| Type | Description |
|---|---|
List[CiteEntry]
|
List of citation entries. |
get_algorithm_description()
get_algorithm_friendly_name()
get_algorithm_keywords()
get_algorithm_references()
Get the algorithm references.
This is used to generate the README of the BioImage Model Zoo export.
Returns:
| Type | Description |
|---|---|
str
|
Algorithm references. |
get_compatible_algorithms()
classmethod
Get the list of compatible algorithms.
Returns:
| Type | Description |
|---|---|
list of str
|
List of compatible algorithms. |
is_supervised()
classmethod
Return whether the algorithm is supervised.
Returns:
| Type | Description |
|---|---|
bool
|
Whether the algorithm is supervised. |